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Co-regulation of ribosomal protein genes as an indicator of growth status:

Detection of Co-regulated Genes by Comparative. Analysis of Microbial

Our method successfully generates tightly co-regulated clusters of genes that .

Printed in U. S. A. Co-regulation of a Gene Homologous to Early Light-induced

DNASTAR offers tools and visualization options to quickly and easily identify

regulation of yeast gene expression is the condition-specific coregulation of

The single gene query (sGQ) is the simplest of all co-response queries. It

(2011) Zhan et al. Neuropathology and Applied Neurobiology. Read by

To what extent can modes of gene regulation be explained by systems-level

The mitochondrial oxidative phosphorylation (OXPHOS) is critical for energy (

We first construct a reliable set of co-regulated genes by combining various

Several genes must be both co-transcribed and co-regulated to define an operon

It also contains tools and resources for evaluation of the regulatory role of . in

The genes are expressed under the same nitrogen-limiting conditions, and we

Mar 31, 2009 . Here we use genomic data to examine the evidence that five candidate TF

Oct 15, 2001 . Identification of co-regulated genes is essential for elucidating transcriptional

Which elements may be involved in regulation of gene transcription? . .. for

Mining Shifting-and-Scaling Co-Regulation Patterns on Gene. Expression

May 13, 2011 . Several motif discovery algorithms have been developed to detect over-

Dec 13, 2009 . Peter Fraser and colleagues report a genome-wide analysis of transcription

Gene expression is to a large extent controlled at the level of mRNA

Keywords: Microarray, gene expression, co-regulation, regulon, regulator .

May 31, 2011 . However, this can be very useful in identifying other genes that are good

Mining Shifting-and-Scaling Co-Regulation Patterns on Gene. Expression

Jun 29, 2010 . Regulatory gene. Repressor Operator Negative control. Catabolite repression.

Our goals are (A) to identify modules of co-regulated genes that undergo similar

Promoter Analysis of Co-regulated Genes in the Yeast Genome. Michael Q.

Mar 16, 2005 . The organization of bacterial genes into operons was originally ascribed to the

Binding Sites in Co-Regulated Genes. Xiaole Liu, Doug Brutlag. Stanford

Aug 8, 2002 . number of conserved co-regulated genes is small in . comprehensive set of co-

Mar 10, 2003 . The identification of co-regulated genes and their transcription- factor binding

eQTL Talk. Tian Zheng,. Dept. of Stat.,. Columbia Univ. Motivation. Background.

As a result the profiles corresponding to a given subset of genes gives.

Dec 13, 2011 . LCGbase: A Comprehensive Database for Lineage-Based Co-regulated Genes.

and organisms shows that the presence of dynamically co-regulated genes is by

In eukaryotes each gene has a transcription regulation site of its own. Therefore

The co-regulation between genes was extracted from knowledge of regulation of

Saccharomyces cerevisiae (Baker's yeast) is found in diverse ecological niches

pression datasets to identify genes exhibiting co-regulation with respect to a

The identification of co-regulated genes and their transcription-factor binding

The regulation system affects the expression of the structural genes of the toxin

Mar 12, 2007 . Dynamic measure of gene co-regulation. 4100189 abstract; Download Citations;

The problem of gene specific co-regulation discovery is to identify, for a particular

From Global Expression Patterns to Gene Co-regulation in Brain Pathologies. by

Although there is evidence of co-regulation within clusters of trans-eQTLs, the

Genes that are part of the same operon in prokaryotes, or have the same

Motivation: Several pattern discovery methods have been proposed to detect

The chromosomes were then examined for groups of neighboring genes that

Citation: Iser WB, Wilson MA, Wood WH III, Becker K, Wolkow CA (2011) Co-

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